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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs9467626 chr6:25873746 C/A 0.000112 496 37.77 31.53 4.1 KM Plot
KIRC rs9467632 chr6:25889706 A/G 3.45E-9 497 37.77 35.7 2.38 KM Plot
KIRC rs9470671 chr6:37667224 A/T 2.72E-7 500 37.47 42.33 3.37 KM Plot
KIRC rs9489184 chr6:117761268 C/T 1.62E-6 507 37.77 27.4 4.57 KM Plot
KIRC rs9489186 chr6:117761445 G/A 1.62E-6 507 37.77 27.4 4.57 KM Plot
KIRC rs953955 chr10:33028487 T/C 3.31E-6 506 37.37 37.63 7.33 KM Plot
KIRC rs9568298 chr13:50233692 A/G 8.02E-11 495 37.03 47.1 2.3 KM Plot
KIRC rs957582 chr4:68412148 A/C 0.000108 509 37.53 37.9 18.4 KM Plot
KIRC rs9593090 chr13:76099117 G/A 6.29E-5 492 42.85 27.6 33.8 KM Plot
KIRC rs9620764 chr22:28441471 C/T 9.66E-6 509 37.47 34.83 7.4 KM Plot
KIRC rs9625524 chr22:29052951 C/T 9.42E-6 509 37.77 32.33 4.35 KM Plot
KIRC rs9636184 chr19:7015238 A/G 8.03E-5 498 37.77 32.6 8.53 KM Plot
KIRC rs9652444 chr15:43543696 A/G 3.89E-5 491 36.72 38.47 10.97 KM Plot
KIRC rs9711644 chr2:67610753 C/T 2.09E-7 508 37.33 37.77 2.03 KM Plot
KIRC rs978167 chr11:34857390 A/G 8.55E-8 504 37.53 31.87 3.3 KM Plot